PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.6G211900.1.p
Common NamePRUPE_ppa007561mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 364aa    MW: 40079.1 Da    PI: 7.1679
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.6G211900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.49.4e-12186232455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          h ++Er+RR+++ ++f  L  ++P +     kK++Ka++L  A++++k+Lq
  Prupe.6G211900.1.p 186 EHIMAERKRREKLSERFIALSAIVPGL-----KKMDKASVLGDAIKHVKQLQ 232
                         699************************.....9******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.491182231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-9185232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.1E-16186245IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-16186244IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.69E-12187236No hitNo description
SMARTSM003533.1E-14188237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MDISSAKWFS ELGIDDYNFI PQCDLNTLDE GFTAQDIATA LGENFKQSLS SESYSSYPTL  60
TTQNTKTTTT TLSGGSSINK TSQTSFERPA KQLKTSNWNS GITEHVSPKP SSSSSQILSF  120
ESSSSPSSKP QHFCNNFDST LKPKDEAPSQ INMQFSPLIS KSSIKDCSQG TKRPYSITRT  180
PSHAQEHIMA ERKRREKLSE RFIALSAIVP GLKKMDKASV LGDAIKHVKQ LQERVKVLEE  240
QTKKRTVESV VFVKKSQLSA DDGTSSCGES FDAHSDEASL PEIEAKVSET DVLIRIHCEK  300
QKGFVVKILS EVEKLQLSVV NSSVLPFGNS ALDITIIAQM EDEFNMSVKD LARNLRGALL  360
KFM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1190195ERKRRE
2191196RKRREK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007205404.10.0hypothetical protein PRUPE_ppa007561mg
TrEMBLM5WBF90.0M5WBF9_PRUPE; Uncharacterized protein
STRINGPOPTR_0007s14480.11e-111(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45534164
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-71bHLH family protein